connected-components

Python connected components with pixel list

别说谁变了你拦得住时间么 提交于 2019-12-02 04:01:56
问题 In matlab you can use cc = bwconncomp(bimg); pixels = cc.PixelIdxList{i} To get pixel list of each connected components. What's the python equivalent? I tried from skimage import measure label = measure.label(bimg) To get the labels, however, this does not come with pixel list. Any suggestions? 回答1: The regionprops function in scikit-image returns the property "coords", an (N, 2) ndarray coordinate list (row, col) of the region. I ran into the same problem and am using this to get the pixel

Matlab: separate connected components

独自空忆成欢 提交于 2019-12-01 07:33:48
I was working on my image processing problem with detecting coins. I have some images like this one here: and wanted to separate the falsely connected coins. We already tried the watershed method as stated on the MATLAB-Homepage: the-watershed-transform-strategies-for-image-segmentation.html especially since the first example is exactly our problem. But instead we get a somehow very messed up separation as you can see here: We already extracted the area of the coin using the regionprops Extrema parameter and casting the watershed only on the needed area. I'd appreciate any help with the

Matlab: separate connected components

一曲冷凌霜 提交于 2019-12-01 05:21:04
问题 I was working on my image processing problem with detecting coins. I have some images like this one here: and wanted to separate the falsely connected coins. We already tried the watershed method as stated on the MATLAB-Homepage: the-watershed-transform-strategies-for-image-segmentation.html especially since the first example is exactly our problem. But instead we get a somehow very messed up separation as you can see here: We already extracted the area of the coin using the regionprops

Use cv2.connectedComponents and eliminate elements with a small number of pixels

≡放荡痞女 提交于 2019-11-30 07:41:15
问题 I want to use the function cv2.connectedComponents to connect components on a binary image, like the following... I have added the feature to cv2. connectedComponents to eliminate elements with a small number of pixels. Unfortunately, the algorithm is extremely slow for large images due to the extension. Is there a way to rewrite the extension to speed up the algorithm? import cv2 import numpy as np def zerolistmaker(n): listofzeros = [0] * n return listofzeros img = cv2.imread('files

How to aggregate matching pairs into “connected components” in Python

馋奶兔 提交于 2019-11-30 00:25:30
Real-world problem: I have data on directors across many firms, but sometimes "John Smith, director of XYZ" and "John Smith, director of ABC" are the same person, sometimes they're not. Also "John J. Smith, director of XYZ" and "John Smith, director of ABC" might be the same person, or might not be. Often examination of additional information (e.g., comparison of biographical data on "John Smith, director of XYZ" and "John Smith, director of ABC") makes it possible to resolve whether two observations are the same person or not. Conceptual version of the problem: In that spirit, am collecting

OrientDB: connected components OSQL query

社会主义新天地 提交于 2019-11-29 23:25:20
问题 Does anybody know how to compute the connected components of a graph with an OrientDB query? I'm trying to replicate what was done here but I'm missing something similar to a REDUCE operator for collections. Thanks in advance. 回答1: This query SELECT distinct(traversedElement(0)) FROM (TRAVERSE both('ManagedBy') FROM Employee) Returned me the right result. At the beginning I could not understand why but then I figured out that the default strategy used in TRAVERSE is DFS that's why we can rely

Detecting object regions in image opencv

微笑、不失礼 提交于 2019-11-29 20:30:28
We're currently trying to detect the object regions in medical instruments images using the methods available in OpenCV, C++ version. An example image is shown below: Here are the steps we're following: Converting the image to gray scale Applying median filter Find edges using sobel filter Convert the result to binary image using a threshold of 25 Skeletonize the image to make sure we have neat edges Finding X largest connected components This approach works perfectly for the image 1 and here is the result: The yellow borders are the connected components detected. The rectangles are just to

Obtaining connected components in R

冷暖自知 提交于 2019-11-29 10:36:05
I have a matrix with values 0 or 1 and I would like to obtain a list of groups of adjacent 1's. For example, the matrix mat = rbind(c(1,0,0,0,0), c(1,0,0,1,0), c(0,0,1,0,0), c(0,0,0,0,0), c(1,1,1,1,1)) > mat [,1] [,2] [,3] [,4] [,5] [1,] 1 0 0 0 0 [2,] 1 0 0 1 0 [3,] 0 0 1 0 0 [4,] 0 0 0 0 0 [5,] 1 1 1 1 1 should return the following 4 connected components: C1 = {(1,1);(2,1)} C2 = {(2,4)} C3 = {(3,3)} C4 = {(5,1);(5,2);(5,3);(5,4);(5,5)} Does anybody has an idea of how to do it fast in R? My real matrix is indeed rather large, like 2000x2000 (but I expect that the number of connected

Use cv2.connectedComponents and eliminate elements with a small number of pixels

偶尔善良 提交于 2019-11-29 05:18:19
I want to use the function cv2.connectedComponents to connect components on a binary image, like the following... I have added the feature to cv2. connectedComponents to eliminate elements with a small number of pixels. Unfortunately, the algorithm is extremely slow for large images due to the extension. Is there a way to rewrite the extension to speed up the algorithm? import cv2 import numpy as np def zerolistmaker(n): listofzeros = [0] * n return listofzeros img = cv2.imread('files/motorway/gabor/eGaIy.jpg', 0) img = cv2.threshold(img, 127, 255, cv2.THRESH_BINARY)[1] # ensure binary retval,

Detecting object regions in image opencv

梦想的初衷 提交于 2019-11-28 16:04:04
问题 We're currently trying to detect the object regions in medical instruments images using the methods available in OpenCV, C++ version. An example image is shown below: Here are the steps we're following: Converting the image to gray scale Applying median filter Find edges using sobel filter Convert the result to binary image using a threshold of 25 Skeletonize the image to make sure we have neat edges Finding X largest connected components This approach works perfectly for the image 1 and here