adjacency-matrix

Graph representation benchmarking

馋奶兔 提交于 2019-12-19 06:45:07
问题 Currently am developing a program that solves (if possible) any given labyrinth of dimensions from 3X4 to 26x30. I represent the graph using both adj matrix (sparse) and adj list. I would like to know how to output the total time taken by the DFS to find the solution using one and then the other method. Programatically, how could i produce such benchmark? 回答1: An useful table to work out with various graphs implementations: OPERATION EDGE LIST ADJ LIST ADJ MATRIX degree(v) O(m) O(d(v)) O(n)

find neighbouring elements of a matrix in R

核能气质少年 提交于 2019-12-17 17:01:10
问题 Edit: huge thanks to the users below for great contributions and to Gregor for benchmarking. Say I have a matrix filled with integer values like this... mat <- matrix(1:100, 10, 10) I can create a list of x, y coordinates of each element like this... addresses <- expand.grid(x = 1:10, y = 1:10) Now for each of these coordinates (i.e. for each element in mat) i would like to find the neighboring elements (including diagonals this should make 8 neighbors). I'm sure there is an easy way, can

Adjacency List and Adjacency Matrix in Python

独自空忆成欢 提交于 2019-12-17 10:42:24
问题 Hello I understand the concepts of adjacency list and matrix but I am confused as to how to implement them in Python: An algorithm to achieve the following two examples achieve but without knowing the input from the start as they hard code it in their examples: For adjacency list: a, b, c, d, e, f, g, h = range(8) N = [ {b:2, c:1, d:3, e:9, f:4}, # a {c:4, e:3}, # b {d:8}, # c {e:7}, # d {f:5}, # e {c:2, g:2, h:2}, # f {f:1, h:6}, # g {f:9, g:8} # h ] For adjacency matrix: a, b, c, d, e, f, g

Create adjacency matrix from nearest neighbour search. (convert adjacency list to adjacency matrix) - Matlab

情到浓时终转凉″ 提交于 2019-12-14 04:02:10
问题 I have a matrix 2000x5 , in the first column the point number, and in columns 2-5 the 4 neighbours (0s if there isnt a neighbour). Is there an efficient way to create an adjacency matrix out of this ? 1 129 0 65 0 2 130 0 66 85 3 131 169 67 0 4 132 170 68 87 5 133 0 69 81 6 134 0 70 82 7 135 173 71 83 8 136 174 72 84 9 137 161 73 0 10 138 162 74 93 11 139 163 75 0 12 140 164 76 95 13 141 165 77 89 14 142 166 78 90 15 143 167 79 91 16 144 168 80 92 17 145 0 81 65 18 146 0 82 66 .... I found

Making a matrix symmetric with regard to row and column name in R

时光怂恿深爱的人放手 提交于 2019-12-13 17:15:56
问题 I want to make my matrix symmetric with regard to the row names and columns names, for example, I have a matrix > ma a b c d a 1 5 9 13 c 9 10 11 15 b 5 6 10 14 d 13 14 15 16 I want to make it like > ma a b c d a 1 5 9 13 b 5 6 10 14 c 9 10 11 15 d 13 14 15 16 Which means the matrix is symmetric in terms of row.names and column names are equal, so as the matrix is symmetric as well (actually I am working on adjacency matrix, thus it is rather important for adjacency matrix to be symmetric.

How to save a adjacency matrix with “get.adjacency()” in R, with iGraph and RStudio?

只谈情不闲聊 提交于 2019-12-13 13:47:01
问题 is it possible to save an adjacency matrix after "get.adjacency()" as an adjacency matrix in R? I tried test <- get.adjacency(network) but I´m getting the error Error in View : cannot coerce class "structure("dgCMatrix", package = "Matrix")" to a data.frame. I´m using RStudio and the package iGraph. 回答1: Try using sparse=FALSE in the call to get.adjacency(...) g <- graph.full(5) test <- get.adjacency(g) class(test) # [1] "dgCMatrix" # attr(,"package") # [1] "Matrix" test <- get.adjacency(g

Graph with adjacency matrix in C

谁说胖子不能爱 提交于 2019-12-13 08:35:06
问题 I have this struct : struct graph { int** adj; /**< Adjacency matrix. */ int n; /**< Number of nodes in graph. */ }; and I have to create a void graph into this function: struct graph *graph_create(int nodes) { //To implement } How can I create a matrix using that double pointer int** adj ? 回答1: Here is the way to define a matrix with malloc() that i catch from GeeksForGeeks with some edition. 2D integer Matrix with int ** and malloc() int r = 3, c = 4, i, j, count; //arr[r][c] int **arr =

R: How to convert graphNEL object into Adjacency Matrix

南楼画角 提交于 2019-12-13 07:37:27
问题 This is my graphNEL object >mergedPathways_d A graphNEL graph with undirected edges Number of Nodes = 41 Number of Edges = 102 I have tried coerce . It did not work out. It asks to pre-define the matrix and To and From didnot work correctly, I had NA as entries in my adj matrix I tried using edgeL . It did not work out. The edge list I got had numbers as edges and not the names of the genes. And I don't know how to map genes onto those numbers. I tried converting it into igraph using igraph

Adjacent matrix

梦想的初衷 提交于 2019-12-13 04:55:37
问题 How can I combine these two functions to create a program that will allow a user to enter the count of vertices and then enter the graph edges? #include <iostream> using namespace std; int **malloc2d(int r, int c) { int **t = new int*[r]; for(int i = 0; i < r; i++) t[i] = new int[c]; return t; } int main() { int i; int j; int adj[V][V]; for(i = 0; i < V; i++) for(j = 0 ; j < V; j++) adj[i][j] = 0; for(i = 0; i < V; i++) adj[i][i]= 1; while (cin>> i >> j) { adj[i][j] = 1; adj[j][i] = 1; }

R: How to get something like adjacency matrix, but on the intersection value of third column? [closed]

隐身守侯 提交于 2019-12-13 04:39:41
问题 Closed. This question is off-topic. It is not currently accepting answers. Want to improve this question? Update the question so it's on-topic for Stack Overflow. Closed 6 years ago . I have data frame like this: V1 V2 LABEL 1 83965 891552 A 2 88599 891552 B 3 42966 891552 C 4 83965 891553 D 5 88599 891553 D 6 42966 891553 B How can I convert it to something like adjacency matrix, but on the intersection of colum-row i would like to have, the third colum value, like that: 891552 891553 42966