dbscan

I would like to do some DBSCAN on Spark. I have currently found 2 implementations: https://github.com/irvingc/dbscan-on-spark https://github.com/alitouka/spark_dbscan I have tested the first one with the sbt configuration given in its github but: functions in the jar are not the same as those in the doc or in the source on github. For example, I cannot find the train function in the jar I manage to run a test with the fit function (found in the jar) but a bad configuration of epsilon (a little to big) put the code in an infinite loop. code : val model = DBSCAN.fit(eps, minPoints, values,

By my understanding of DBSCAN, it's possible for you to specify an epsilon of, say, 100 meters and — because DBSCAN takes into account density-reachability and not direct density-reachability when finding clusters — end up with a cluster in which the maximum distance between any two points is > 100 meters. In a more extreme possibility, it seems possible that you could set epsilon of 100 meters and end up with a cluster of 1 kilometer: see [2][6] in this array of images from scikit learn for an example of when that might occur. (I'm more than willing to be told I'm a total idiot and am

I have a dataframe with latitude and longitude pairs. Here is my dataframe look like. order_lat order_long 0 19.111841 72.910729 1 19.111342 72.908387 2 19.111342 72.908387 3 19.137815 72.914085 4 19.119677 72.905081 5 19.119677 72.905081 6 19.119677 72.905081 7 19.120217 72.907121 8 19.120217 72.907121 9 19.119677 72.905081 10 19.119677 72.905081 11 19.119677 72.905081 12 19.111860 72.911346 13 19.111860 72.911346 14 19.119677 72.905081 15 19.119677 72.905081 16 19.119677 72.905081 17 19.137815 72.914085 18 19.115380 72.909144 19 19.115380 72.909144 20 19.116168 72.909573 21 19.119677 72

Using dbscan in package fpc I am able to get an output of: dbscan Pts=322 MinPts=20 eps=0.005 0 1 seed 0 233 border 87 2 total 87 235 but I need to find the cluster center (mean of cluster with most seeds). Can anyone show me how to proceed with this? Just index back into the original data using the cluster ID of your choice. Then you can easily do whatever further processing you want to the subset. Here is an example: library(fpc) n = 100 set.seed(12345) data = matrix(rnorm(n*3), nrow=n) data.ds = dbscan(data, 0.5) > data.ds dbscan Pts=100 MinPts=5 eps=0.5 0 1 2 3 seed 0 1 3 1 border 83 4 4 4

DBSCAN 是一种基于密度的分类方法 若一个点的密度达到算法设定的阖值则其为核心点（即R领域内点的数量不小于minPts） 所以对于DBSCAN需要设定的参数为两个半径和minPts 我们以一个啤酒的分类指标来做 第一步：提取数据，并分配变量 import pandas as pd beer = pd.read_csv('data.txt', sep=' ') X = beer[["calories","sodium","alcohol","cost"]] 第二步：构建模型,并做测试，我们使用的r半径为10，最小样本数为2 db = DBSCAN(eps=10, min_samples=2).fit(X) print(db.labels_) beer['cluster_db'] = db.labels_ 第三步:根据轮廓系数选定参数，我们发现i=18时，轮廓参数最大 for i in range(5, 20): print(metrics.silhouette_score(X, DBSCAN(eps=i, min_samples=2).fit(X).labels_)) #X表示数据,DBSCAN(eps=i, min_samples=2).fit(X).labels_)表示分类的结果标签 DBSCAN 是一种基于密度的分类方法 若一个点的密度达到算法设定的阖值则其为核心点