subgraph

Why does Graphviz no longer minimise edge lengths when subgraphs are introduced

时光毁灭记忆、已成空白 提交于 2019-12-10 17:52:59
问题 I have this Graphviz graph: digraph { rankdir="LR"; overlap = true; Node[shape=record, height="0.4", width="0.4"]; Edge[dir=none]; A B C D E F G H I A -> B -> C D -> E -> F G -> H -> I Edge[constraint=false] A -> D -> G subgraph clusterX { A B } subgraph clusterY { E H F I } } which produces this output: I would have expected the length of the edge between A and D to be minimised so that the nodes would be arranged as: A B C D E F G H I rather than D E F G H I A B C This works as expected if

graphviz: subgraph has same node, how to unique

妖精的绣舞 提交于 2019-12-10 12:56:47
问题 I create dot file by my perl script. here is subgraphs which contains same node. eg: subgraph{aa->bb->cc;} subgraph{dd->bb->ee;} I know those subgraph use same namespace, so my result output is a mess. In each subgraph, I can make them unique, like bb and bb_1 below, subgraph{aa->bb->cc; bb_1->dd;} but it hard to make all node in all subgraphs unique. please help. if here is some methods to make each subgraph "strict" or use different namespace? 回答1: The label presented for a node is only

Generate all possible subgraphs of a directed graph keeping the number of vertices

Deadly 提交于 2019-12-10 10:48:36
问题 I have two lists of vertices: V and S . I would like to generate all possible directed graphs from V and S so, that each vertex from V has only one out-edge and exactly one in-edge, and each vertex from S can have any number of in- and out- edges. Each graph in the result should contain exactly all vertices from V and from S . The result can contain both connected and disconnected graphs. First I thought it was a powerset-related problem, but powerset has many other sets that may contain just

How do I get graphviz to generate fixed sized subgraphs?

三世轮回 提交于 2019-12-10 02:06:39
问题 I've been struggling with this for a while and cannot seem to find a straight answer. I'm working with compound subgraphs in graphviz and cannot seem to find the right combination of settings to force two subgraphs to align with each other. Enclosed is a simple example to show the problem... digraph g { compound=true; subgraph cluster_top { graph [color=black, label="Top", rank=min]; nodeA; nodeB; nodeC cluster_top_DUMMY [shape=point style=invis] } subgraph cluster_service { graph [color

Extracting subgraph from neo4j database

蓝咒 提交于 2019-12-08 08:26:27
问题 I have a graph in neo4j database. I want to extract a sub graph given a particular node and a particular depth. I tried using the traversal framework, but it only returns a set of paths. It gives path up to a particular depth. How can i construct a sub graph based on the set of paths that i get? Is there any other way to get the required result? 回答1: In case that, by subgraph, you mean a list of nodes, and you've got the Path objects from the traversal already, you could just collect the end

algorithm to check whether a given graph is subgraph of another graph [closed]

こ雲淡風輕ζ 提交于 2019-12-06 07:32:47
It's difficult to tell what is being asked here. This question is ambiguous, vague, incomplete, overly broad, or rhetorical and cannot be reasonably answered in its current form. For help clarifying this question so that it can be reopened, visit the help center . Closed 8 years ago . i assume that we have 2 labeled graphs G and T and the algorithm determine if G a subgraph of T and the corresponding vertices in the main graphT and the subgraph G should have same label That problem is called "subgraph isomorphism" and it is NP-complete (and so likely to be hard). Do you need a general solution

Generate all possible subgraphs of a directed graph keeping the number of vertices

我怕爱的太早我们不能终老 提交于 2019-12-06 05:07:29
I have two lists of vertices: V and S . I would like to generate all possible directed graphs from V and S so, that each vertex from V has only one out-edge and exactly one in-edge, and each vertex from S can have any number of in- and out- edges. Each graph in the result should contain exactly all vertices from V and from S . The result can contain both connected and disconnected graphs. First I thought it was a powerset-related problem, but powerset has many other sets that may contain just one element (and I do not need those). My current strategy is to: find all pairs between vertices from

sampling subgraphs from different sizes using igraph

六月ゝ 毕业季﹏ 提交于 2019-12-05 17:03:45
问题 I have an igraph object mygraph with ~10,000 nodes and ~145,000 edges, and I need to create a number of subgraphs from this graph but with different sizes. What I need is to create subgraphs from a determined size (from 5 nodes to 500 nodes) where all the nodes are connected in each subgraph. I need to create ~1,000 subgraphs for each size (i.e, 1000 subgraphs for size5, 1000 for size 6, and so on), and then calculate some values for each graph according to different node attributes. I have

How do I get graphviz to generate fixed sized subgraphs?

自作多情 提交于 2019-12-05 01:36:08
I've been struggling with this for a while and cannot seem to find a straight answer. I'm working with compound subgraphs in graphviz and cannot seem to find the right combination of settings to force two subgraphs to align with each other. Enclosed is a simple example to show the problem... digraph g { compound=true; subgraph cluster_top { graph [color=black, label="Top", rank=min]; nodeA; nodeB; nodeC cluster_top_DUMMY [shape=point style=invis] } subgraph cluster_service { graph [color=black, label="Bottom", rank=min]; node1; node2; node3; node4; node5; extra_long_node cluster_bottom_DUMMY

NetworkX DiGraph create subgraph (DiGraph) by node

若如初见. 提交于 2019-12-04 08:58:45
I would like to get a subgraph (red area) by node: The subgraph is composed of all the nodes reachable from the input node. like G.subgraph(3) returns a new DiGraph from the red area. For example I create a DiGraph as this: import networkx as nx G = nx.DiGraph() G.add_path([1,2,3,4]) G.add_path([3,'a','b']) A = nx.to_agraph(G) A.layout() A.draw('graph.png') I looked into https://networkx.github.io/documentation/latest/reference/generated/networkx.Graph.subgraph.html and converting it to unidirectional. I tested out_egdes, strong/weak_connected_component, but its never worked. I also looked How