r-markdown

How do I knit a pdf containing gt tables?

蓝咒 提交于 2021-02-11 12:41:12
问题 I'm writing up a report in R Markdown and I made some tables using the gt package. However, when I attempt to knit to a pdf or html file, I get this error: ! LaTeX Error: There's no line here to end. Error: LaTeX failed to compile final_report.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See final_report.log for more info. Interestingly, I'm able to knit to a Word document. I did do some experimenting to make sure it was the tables that were causing it, just to be sure.

Rendering multiple parametrized Rmarkdown files by render_function() fails

只谈情不闲聊 提交于 2021-02-11 12:40:56
问题 I wrote a parametrized report that will create individual reporting for ~120 centers in two different languages. The reports are created by the knit-button so far (which works perfectly fine). Inspired by @djnavarro's tweet (https://twitter.com/djnavarro/status/1101623527872970754) I tried writing a function to render multiple parametrized reports in one command, however, the function fails with Error as shown in the minimal reprex below: The .Rmd-file called summary_cyl.Rmd --- output: pdf

Shapiro Wilks test is not working in R markdown

落爺英雄遲暮 提交于 2021-02-11 12:23:39
问题 I am working on a piece of r markdown code. I am simply applying a shapiro.wilks test on a data. When I try to run the code in R studio in usual way, I dont get any issue. But when I try to run the code in r markdown, I am getting error provided below: Error in shapiro.test(Metric) : sample size must be between 3 and 5000 Calls: ,Anonymius> ... summarise -> summarise.tbl_df -> summarise_impl _> shapiro.test In addition: There were 32 warnings (use warnings() to see them) Warnings are: Code is

Including an image in R Markdown PDF table

会有一股神秘感。 提交于 2021-02-11 12:23:32
问题 I am working in R Markdown, knitting to PDF. I thought the following code should create a table with a local image, but it is not working. Any help would be greatly appreciated! column1 <- c("1", "2", "3") column2 <- c("a", "b", "c") column3 <- c("x", "y", "z") dat <- data.frame(column1, column2, column3) dat$column1[1] <- "![image1](green.png){ width=25px }" print(kable(dat)) 回答1: --- title: "pic in column" author: "test" date: "2014/08/03" output: html_document --- ```{r results='asis'}

I have suppressed warnings in knitr output but the warnings do not show up in the Rmarkdown console as expected. How do I view these?

左心房为你撑大大i 提交于 2021-02-11 07:26:51
问题 I am using Knitr and rmarkdown. I have suppressed warnings in the .pdf output and then typically the warnings are listed in the rmarkdown console. However, in the case of one specific report, instead of getting the warnings listed in the rmarkdown console, I get this message: There were 15 warnings (use warnings() to see them). Where do I write this warnings() code to see the list of warnings? I have tried adding warnings() at the bottom of my rmarkdown document but the output is: NULL. 回答1:

Render LaTeX tables in HTML using rmarkwown

佐手、 提交于 2021-02-11 06:08:52
问题 I am trying to render the following table in a RMD file: \begin{table}[] \centering \caption{My caption} \label{my-label} \begin{tabular}{|l|} \hline \\ \hline \end{tabular} \end{table} So far no success. Is there any fundamental reason why rmarkdown cannot compile LaTeX enviroments (other than equations) to HTML? 回答1: In a markdown document, the expected input markup language is (r)markdown. You should not expect pandoc to automatically recognize arbitrarily mixed markup languages. LaTeX

Render LaTeX tables in HTML using rmarkwown

感情迁移 提交于 2021-02-11 06:08:44
问题 I am trying to render the following table in a RMD file: \begin{table}[] \centering \caption{My caption} \label{my-label} \begin{tabular}{|l|} \hline \\ \hline \end{tabular} \end{table} So far no success. Is there any fundamental reason why rmarkdown cannot compile LaTeX enviroments (other than equations) to HTML? 回答1: In a markdown document, the expected input markup language is (r)markdown. You should not expect pandoc to automatically recognize arbitrarily mixed markup languages. LaTeX

Render LaTeX tables in HTML using rmarkwown

余生长醉 提交于 2021-02-11 06:06:58
问题 I am trying to render the following table in a RMD file: \begin{table}[] \centering \caption{My caption} \label{my-label} \begin{tabular}{|l|} \hline \\ \hline \end{tabular} \end{table} So far no success. Is there any fundamental reason why rmarkdown cannot compile LaTeX enviroments (other than equations) to HTML? 回答1: In a markdown document, the expected input markup language is (r)markdown. You should not expect pandoc to automatically recognize arbitrarily mixed markup languages. LaTeX

Render LaTeX tables in HTML using rmarkwown

谁说我不能喝 提交于 2021-02-11 06:06:45
问题 I am trying to render the following table in a RMD file: \begin{table}[] \centering \caption{My caption} \label{my-label} \begin{tabular}{|l|} \hline \\ \hline \end{tabular} \end{table} So far no success. Is there any fundamental reason why rmarkdown cannot compile LaTeX enviroments (other than equations) to HTML? 回答1: In a markdown document, the expected input markup language is (r)markdown. You should not expect pandoc to automatically recognize arbitrarily mixed markup languages. LaTeX

shiny htmlOutput() – export to pdf

天大地大妈咪最大 提交于 2021-02-11 00:57:41
问题 I want to export html objects from shiny app to pdf. In order to export table, I was using .Rmd template (based on How to make pdf download in shiny app response to user inputs?), however I do not know how to pass html object to PDF in shiny app. Example app: library(shiny) ui <- shinyUI( fluidPage( fluidRow( column(width=4, htmlOutput("Table1"), htmlOutput("Table2"), htmlOutput("Table3") )) ) ) server <- shinyServer(function(input, output, session){ #****************************************