r-markdown

I have a R markdown file that I want to output rmarkdown from the script itself. For example, I would have the following simple code in an Rmd file. --- title: "test" author: "johndoe" date: "September 5, 2015" output: html_document --- ```{r setup, include=FALSE} knitr::opts_chunk$set(echo = TRUE) ``` ```{r cars} paste("## This is a Heading in Code") summary(cars) ``` I want "This is a Heading in Code" to render in rmarkdown. There is a solution in an R script to generate markdown as per http://rmarkdown.rstudio.com/r_notebook_format.html . But I am trying to figure out how to do this in a

Is there a way to edit the title slide of a R Markdown Slidy Presentation? I am able to add the header, footer, and custom css: title: "Slidy Template" author: "" date: "June 18, 2015" runtime: shiny output: slidy_presentation: css: ./styles/Slidy_Styles.css includes: after_body: ./styles/doc_suffix.html before_body: ./styles/header.html But I can't figure out how to either add anything besides title, author, and date to the slide, or else replace the standard slidy title slide with a custom html template, like I do with the header and footer. Is there a way to do this? You can modify the part

I am having issues rendering an rChart made with 'nPlot' when I knit an R Markdown document to html. I followed the solution discussed in this question , but it was unsuccessful. Here is my .Rmd code ```{r, echo=FALSE} library(knitr) ``` --- title: "Untitled" author: "Test" date: "01/23/2015" output: html_document --- This is an R Markdown document. Markdown is a simple formatting syntax for authoring HTML, PDF, and MS Word documents. For more details on using R Markdown see <http://rmarkdown.rstudio.com>. When you click the **Knit** button a document will be generated that includes both

I have the following Rmarkdown (.Rmd) document where I call existing .png images and create a .pdf with captions. By default, pandoc? is automatically adding "Figure #." before the caption for each picture. I can see how this would be the normal thing to do, but in my case I would like to define this. I have found variations on this topic but don't seem to find a solution. Below is an example of how my .Rmd file looks: --- title: "TITLE" author: "ME" date: "`r Sys.Date()`" output: pdf_document --- ```{r setup, include=FALSE} knitr::opts_chunk$set(echo = TRUE) ``` ![Caption for figure 1]

As an example, I might want to use the following rule to color the cells: (edited to un-trivialize) Blue if > 4 No fill if <= 4 and >= 3.5 Yellow if >= 3 and < 3.5 Orange if < 3 Create tables with conditional formatting with RMarkdown + knitr doesn't help me because I don't just want to highlight cells satisfying one set of criteria. Example rmd: --- title: "Untitled" output: html_document --- ```{r, message = FALSE, results = "asis"} library(knitr) library(dplyr) head(iris) %>% kable ``` I'll take a solution utilizing DataTables if that's what it takes Victorp Hello here a solution using

I want to insert a picture at the beginning of text using a code block, not markdown. I am using the Tufte handout template output: rmarkdown::tufte_handout and when I insert it straight after the YAML header but before TOC like this: \centering  \raggedright \tableofcontents \clearpage the image then spans the main body. I know that with chunks there is an option to have the chunk to span the whole page placing fig.fullwidth = TRUE in the chunk header, but I am a bit stuck with this as I am not generating any graph from data and I do not know how to

Is it possible to get all of the code in a appendix. Say I have two chunks in a document and then some text. ```{r, echo=TRUE} x <- 4+5 x ``` Above is X output. ```{r, echo=TRUE} y <- 22+325 y ``` Above is Y output. And then I want all of the code in a appendix but shown as if I put eval=FALSE in the chunk. Something like this ```{r, SHOW_ALL_CODE=TRUE} ``` Expected output: Chunk_1 y <- 22+325 y Chunk_2 x <- 4+5 x Thierry knitr::purl() can extract all R code from a markdown file into an R script. You can add that as an appendix. ## appendix ```{r code=readLines(knitr::purl('~/path/to/file.Rmd'

Have been trying to change the font size of all text in the tables generated by DT. However, I could only figure out how to change the size of the records using formatStyle(names(datCalc), fontSize = '12px') . The column headers and buttons have text of the same size. Using R Markdown in RStudio. I think you almost got there. I solved it by explicitly telling DT::formatStyle() which columns I wanted. I first tried using the names() or colnames() approach, as you did. For some reason this didn't work: iris %>% DT::datatable() %>% DT::formatStyle(columns = colnames(.), fontSize = '50%') However,