r-markdown

I found this - http://shiny.rstudio.com/gallery/download-knitr-reports.html - awesome example that can create static PDFs, HTMLs, and Word Docs. What I want to be able to do is upload a data set that can then generate a templatized Shiny Presentation. I've tried multiple routes with little success. The furthest I've gotten is including this code in my markdown file: --- title: "shinyPresentation" author: "maloneypatr" date: "Wednesday, September 03, 2014" output: ioslides_presentation: self_contained: false lib_dir: libs runtime: shiny --- Upon trying to download the sample .HTML file, I get

I've created a plotly chart in R and then save the plot via htmlwidget so the plot can called in slidify. I played with width and height , in both layout argument and index.Rmd to fit the plot on a slidify slide but the final result always cut the bottom portion of the chart when some texts are added together. How can I truly adjust the size of the plotly chart in slidify? The code in R script ## first slide date <- seq(from = as.POSIXct("2015/4/1"), to = as.POSIXct("2015/10/1"), by = "month") as.Date(date, "%Y/%m/%d") set.seed(2016) tot.prem <- runif(n = 7, min = 0, max = 1200) pol.frce <-

I am writing a report in Rmarkdown which shall be rendered in html because it contains Rshiny chunks. Is there any way I can add line numbers to the file? Importantly I need line numbers for the text and not for the code chunks as asked here . I wonder if it is possible to add some CSS to the .Rmd file below but wouldn't know how to do that. --- title: "Title" author: "Yourname" date: "June 16, 2016" output: html_document runtime: shiny --- This R Markdown document is made interactive using Shiny. Unlike the more traditional workflow of creating static reports, you can now create documents

I'm trying to visualize a cohort analysis, and wanted to use RenderDataTable in shiny to get this sort of a visualization where I would be able to highlight all the cells based on a separate column having values 1/0, with 1 being shaded and 0 not being shaded. I Tried a couple of things, including trying to use geom_tile in ggplot2 , but it was of no avail. I also tried looking at rpivotTable , but I wasn't able to figure out how to shade certain cells. Example Data: df <- " cohort wk value flag 1 1 24 0 1 2 12 0 1 3 10 0 1 4 5 0 1 5 2 0 2 1 75 0 2 2 43 1 2 3 11 0 2 4 14 0 3 1 97 0 3 2 35 0 3

I want an svg image to be embedded in an pdf document that I render by using rmarkdown. This doesn't seem possible, or do I miss something? If it's not possible is there a way to first convert the .svg image to a .png before embedding it? In my rmarkdown file it looks like this (notice the two different kinds of inserting the image): ```{r results="asis",eval=TRUE,echo=FALSE,message=FALSE, error=FALSE, warning=FALSE, comment = NA,fig.height=10} cat("") ```  I found a solution that works for me. It is based on using the svg LaTeX package and some LaTeX code

I'm wondering if anyone can help me with a dilemma I'm having. I have a dataset of around 300 individuals that contains some basic information about them (e.g. age, gender). I want to knit a separate R markdown report for each individual that details this basic information, in Word format. And then I want to save each report with their unique name. The actual code which sits behind the report doesn't change, only the details of each individual. For example: Report 1: "Sally is a female who is 34 years old". (Which I would want to save as Sally.doc) Report 2: "Mike is a male who is 21 years old

So I have a vignette, vignettes/test-vignette3.Rmd : --- title: "Sample Document" output: html_document: highlight: kate theme: spacelab toc: yes pdf_document: toc: yes --- Header ========= When I hit the knit HTML button, I get the following: processing file: test-vignette3.Rmd output file: test-vignette3.knit.md Output created: /tmp/RtmpKVpegL/preview-5ef42271c0d5.dir/test-vignette3.html However, if I copy this file to inst/doc and hit the knit HTML button, I get: processing file: test-vignette3.Rmd output file: test-vignette3.knit.md Output created: test-vignette3.html My questions are: How