dbscan

Obtain the Clustered Documents of DBSCAN

青春壹個敷衍的年華 提交于 2019-12-13 11:24:11
问题 I attempted to use DBSCAN (from scikit-learn) to cluster text documents. I use TF-IDF (TfidfVectorizer in sklearn) to create the feature of each document. However, I have not found a way to obtain (print) the documents that are clustered by DBSCAN. The DBSCAN in sklearn, provides an attribute called 'labels_' which allows us to get the cluster group labels (e.g. 1, 2, 3, -1 for noise). But, I want to get the documents that are clustered by DBSCAN, instead of the cluster group labels. To

How can I make my program to use multiple cores of my system in python?

99封情书 提交于 2019-12-13 02:56:20
问题 I wanted to run my program on all the cores that I have. Here is the code below which I used in my program(which is a part of my full program. somehow, managed to write the working flow). def ssmake(data): sslist=[] for cols in data.columns: sslist.append(cols) return sslist def scorecal(slisted): subspaceScoresList=[] if __name__ == '__main__': pool = mp.Pool(4) feature,FinalsubSpaceScore = pool.map(performDBScan, ssList) subspaceScoresList.append([feature, FinalsubSpaceScore]) #for feature

Deciding input values to DBSCAN algorithm

南楼画角 提交于 2019-12-12 03:15:53
问题 I have written code in python to implement DBSCAN clustering algorithm. My dataset consists of 14k users with each user represented by 10 features. I am unable to decide what exactly to keep as the value of Min_samples and epsilon as input How should I decide that? Similarity measure is euclidean distance.(Hence it becomes even more tough to decide.) Any pointers? 回答1: DBSCAN is pretty often hard to estimate its parameters. Did you think about the OPTICS algorithm? You only need in this case

How can I choose eps and minPts (two parameters for DBSCAN algorithm) for efficient results?

谁都会走 提交于 2019-12-11 17:07:43
问题 What routine or algorithm should I use to provide eps and minPts parameters to DBSCAN algorithm for efficient results? 回答1: The DBSCAN paper suggests to choose minPts based on the dimensionality, and eps based on the elbow in the k-distance graph. In the more recent publication Schubert, E., Sander, J., Ester, M., Kriegel, H. P., & Xu, X. (2017). DBSCAN Revisited, Revisited: Why and How You Should (Still) Use DBSCAN. ACM Transactions on Database Systems (TODS), 42(3), 19. the authors suggest

Clustering algorithm with different epsilons on different axes

一曲冷凌霜 提交于 2019-12-11 03:57:01
问题 I am looking for a clustering algorithm such a s DBSCAN do deal with 3d data, in which is possible to set different epsilons depending on the axis. So for instance an epsilon of 10m on the x-y plan, and an epsilon 0.2m on the z axis. Essentially, I am looking for large but flat clusters. Note: I am an archaeologist, the algorithm will be used to look for potential correlations between objects scattered in large surfaces, but in narrow vertical layers 回答1: Solution 1: Scale your data set to

How to cluster an instance with Weka's DBSCAN?

最后都变了- 提交于 2019-12-09 15:37:22
问题 I've been trying to use the DBSCAN clusterer from Weka to cluster instances. From what I understand I should be using the clusterInstance() method for this, but to my surprise, when taking a look at the code of that method, it looks like the implementation ignores the parameter: /** * Classifies a given instance. * * @param instance The instance to be assigned to a cluster * @return int The number of the assigned cluster as an integer * @throws java.lang.Exception If instance could not be

Python: DBSCAN in 3 dimensional space

蹲街弑〆低调 提交于 2019-12-07 02:18:27
问题 I have been searching around for an implementation of DBSCAN for 3 dimensional points without much luck. Does anyone know I library that handles this or has any experience with doing this? I am assuming that the DBSCAN algorithm can handle 3 dimensions, by having the e value be a radius metric and the distance between points measured by euclidean separation. If anyone has tried implementing this and would like to share that would also be greatly appreciated, thanks. 回答1: You can use sklearn

python3(五)无监督学习

拟墨画扇 提交于 2019-12-06 16:45:46
无监督学习 目录 1 关于机器学习 2 sklearn库中的标准数据集及基本功能 2.1 标准数据集 2.2 sklearn库的基本功能 3 关于无监督学习 4 K-means方法及应用 5 DBSCAN方法及应用 6 PCA方法及其应用 7 NMF方法及其实例 8 基于聚类的“图像分割” 正文 回到顶部 1 关于机器学习    机器学习是实现人工智能的手段, 其主要研究内容是如何利用数据或经验进行学习, 改善具体算法的性能      多领域交叉, 涉及概率论、统计学, 算法复杂度理论等多门学科      广泛应用于网络搜索、垃圾邮件过滤、推荐系统、广告投放、信用评价、欺诈检测、股票交易和医疗诊断等应用   机器学习的分类      监督学习 (Supervised Learning)       从给定的数据集中学习出一个函数, 当新的数据到来时, 可以根据这个函数预测结果, 训练集通常由人工标注      无监督学习 (Unsupervised Learning)       相较于监督学习, 没有人工标注      强化学习 (Reinforcement Learning,增强学习)       通过观察通过什么样的动作获得最好的回报, 每个动作都会对环境有所影响, 学习对象通过观察周围的环境进行判断      半监督学习 (Semi-supervised Learning)

异常值检测方法(Z-score,DBSCAN,孤立森林)

只愿长相守 提交于 2019-12-06 06:19:15
机器学习_深度学习_入门经典(博主永久免费教学视频系列) https://study.163.com/course/courseMain.htm?courseId=1006390023&share=2&shareId=400000000398149 微信扫二维码,免费学习更多python资源 数据预处理的好坏,很大程度上决定了模型分析结果的好坏。(Garbage In Garbage Out!) 其中,异常值(outliers)检测是整个数据预处理过程中,十分重要的一环。方法也是多种多样。比如有基于经典统计的方法——三倍于标准差之上的数据为异常值等等。 由于异常值检验,和去重、缺失值处理不同,它带有一定的主观性。所以,想请问一下各位大牛,平时你们更愿意相信哪种或哪几种异常值检测的方法。 作者:阿里云云栖社区 链接:https://www.zhihu.com/question/38066650/answer/549125707 来源:知乎 著作权归作者所有。商业转载请联系作者获得授权,非商业转载请注明出处。 异常值检测的常见四种方法,分别为Numeric Outlier、Z-Score、DBSCA以及Isolation Forest 在训练机器学习算法或应用统计技术时,错误值或异常值可能是一个严重的问题,它们通常会造成测量误差或异常系统条件的结果,因此不具有描述底层系统的特征。实际上

ELKI DBSCAN R* tree index

我怕爱的太早我们不能终老 提交于 2019-12-05 19:42:12
In MiniGUi, I can see db.index . How do I set it to tree.spatial.rstarvariants.rstar.RStartTreeFactory via Java code? I have implemented: params.addParameter(AbstractDatabase.Parameterizer.INDEX_ID,tree.spatial.rstarvariants.rstar.RStarTreeFactory); For the second parameter of addParameter() function tree.spatial...RStarTreeFactory class not found // Setup parameters: ListParameterization params = new ListParameterization(); params.addParameter( FileBasedDatabaseConnection.Parameterizer.INPUT_ID, fileLocation); params.addParameter(AbstractDatabase.Parameterizer.INDEX_ID, RStarTreeFactory.class