ImportError: cannot import name 'factorial'

Question

I want to use a logit model and trying to import statsmodels library. My Version: Python 3.6.8

The best suggestion I got is to downgrade scipy but unclear how to and to what version should I downgrade. Please help how to resolve. https://github.com/statsmodels/statsmodels/issues/5747

import statsmodels.formula.api as smf

ImportError                               Traceback (most recent call last)
<ipython-input-52-f897a2d817de> in <module>
----> 1 import statsmodels.formula.api as smf

~/anaconda3/envs/py36/lib/python3.6/site-packages/statsmodels/formula/api.py in <module>
     13 from statsmodels.robust.robust_linear_model import RLM
     14 rlm = RLM.from_formula
---> 15 from statsmodels.discrete.discrete_model import MNLogit
     16 mnlogit = MNLogit.from_formula
     17 from statsmodels.discrete.discrete_model import Logit

~/anaconda3/envs/py36/lib/python3.6/site-packages/statsmodels/discrete/discrete_model.py in <module>
     43 
     44 from statsmodels.base.l1_slsqp import fit_l1_slsqp
---> 45 from statsmodels.distributions import genpoisson_p
     46 
     47 try:

~/anaconda3/envs/py36/lib/python3.6/site-packages/statsmodels/distributions/__init__.py in <module>
      1 from .empirical_distribution import ECDF, monotone_fn_inverter, StepFunction
----> 2 from .edgeworth import ExpandedNormal
      3 from .discrete import genpoisson_p, zipoisson, zigenpoisson, zinegbin

~/anaconda3/envs/py36/lib/python3.6/site-packages/statsmodels/distributions/edgeworth.py in <module>
      5 import numpy as np
      6 from numpy.polynomial.hermite_e import HermiteE
----> 7 from scipy.misc import factorial
      8 from scipy.stats import rv_continuous
      9 import scipy.special as special

ImportError: cannot import name 'factorial'```

Answer 1

From this issue on statsmodels' github repo, the solution appears to be to downgrade SciPy to version 1.2 (current version is 1.3, which you appear to use).
At least for me, SciPy 1.2 has the factorial function in the scipy.misc package.

You can do

python3.6 -m pip install scipy==1.2 --upgrade

Use the --user option with that if you don't have standard install rights.

Perhaps you want to avoid using pip, since you're using Conda. You should be able to pin the version of scipy in Conda as well, but if you don't plan to add any other packages to your environment, just use the pip version.
Of course, downgrading SciPy may cause issues elsewhere, but that's hard to foresee, especially without knowing exactly what other packages and dependencies you have installed; you'll just have to find out. Fingers crossed for not ending up in dependency hell (as you've already on the doorstep).

---

For the more curious, scipy.misc.factorial has been deprecated since version 1.0; scipy.special.factorial should be used instead.

Importing in version 1.2 does not, however, show any clear warning, nor does using it. This might explain why statsmodels still uses the old import. A fix is on the way for the next statsmodels release.

Answer 2

Thanks @9769953.

1. pip3 uninstall statsmodels # make sure to remove old versions
2. pip3 install statsmodels==0.10.0rc2 --pre --user # install release candidate of statsmodels
3. Restarting the kernel of the jupyter notebook

fixed it for me.
You can check your versions with pip3 list

Summary: copy&run the following in your terminal:

pip3 uninstall statsmodels -y
pip3 install statsmodels==0.10.0rc2 --pre --user

and don't forget to restart the kernel of your jupyter notebook :)

Answer 3

!pip install scipy==1.2  --user
import statsmodels.formula.api as sm
from statsmodels.formula.api import ols
from statsmodels.sandbox.regression.predstd import wls_prediction_std`

I still got the following after scipy 1.2 was successfully installed:

ImportError: cannot import name 'factorial' from 'scipy.misc'

Answer 4

I ran into this issue because I was using import math AND had the scipy 1.3 version loaded. With the guidance provided here, I downgraded to scipy 1.2 and disabled the math package to solve the problem. - E