问题
I'm running R 2.9 on a large EC2 Ubuntu instance, loaded with RAM, but without a terminal. When I load a library that has display dependencies, such as the sqldf package, I receive the following error:
library(sqldf)
...
Loading required package: tcltk
Loading Tcl/Tk interface ... Error in fun(...) : couldn't connect to display "localhost:11.0"
Error : .onLoad failed in 'loadNamespace' for 'tcltk'
Error: package 'tcltk' could not be loaded
This seems to be a general problem, and I'm wondering how others have solved it. Installing an X11 server is not a desirable solution.
回答1:
Use the virtual framebuffer X11 server -- we do the same to build packages requiring X11 for R builds in headless chroots. Taking e.g. pars of the Build-Depends from rggobi:
xvfb xauth xfonts-base
After installing these you can use the xvfb-run command. If you start R via e.g.
xvfb-run R --no-save
you should now be able to use routines and commands requiring X11 as e.g. some of the plotting devices, or the tcl/tk initialization which also insists on having X11.
The same trick is useful for web servers.
回答2:
Dirk's suggestion indeed works well, if you have control over the server & can run xvfb. If not, read on...
in newer versions of R (>= 2.10 & maybe earlier), this is no longer an error, it's a warning:
> library(tcltk)
Loading Tcl/Tk interface ... done
Warning message:
In fun(libname, pkgname) : no DISPLAY variable so Tk is not available
You can now suppress this warning, and the subsequent package loading message via:
> suppressPackageStartupMessages(suppressWarnings(library(tcltk)))
Often you will see this message due to loading a package like qvalue which depends on tcltk; if you're after silent operation, you should silently load tcltk first, then the package of interest:
> suppressPackageStartupMessages(suppressWarnings(library(tcltk)))
> library(qvalue)
Mark
resurrected due to: http://dev.list.galaxyproject.org/wrapping-qvalue-in-Galaxy-td4655164.html
来源：https://stackoverflow.com/questions/34277506/using-r-without-x11