I am facing strange problem with eclipse [Ganymede]. Once I added some breakpoints in my code and now even after I delete all those breakpoints, it appears again when I start the eclipse.
So, regularly first thing what I have to do after starting the eclipse is manually delete all breakpoints to start working. Probably eclipse stores the information about these breakpoints in some file and, I think, if I will delete that file my problem might be resolved. Please let me know if you have some solution for this.
Another solution
Eclipse -> Run -> Remove All Breakpoints - for removing all Breakpoints for all Time
Eclipse -> Run -> Skip All Breakpoints - for temporary remove breakpoints
Perhaps it helps to check the Breakpoints view (Ctrl+3, type 'breakpoints') and see if they are inactive only or something. There, you can also deactivate them all at once (strikeout button).
You can go to debug prespective
and check or uncheck the desired breakpoint in the Breakpoints view
or show the view from the Window menu
Happened to me to. I think it's eclipse bug. I filed a bug for it, will update once there's progress on it.
来源：https://stackoverflow.com/questions/3986035/how-to-remove-breakpoint-from-eclipse