boxplot

How do I create a categorical scatterplot in R like boxplots?

我的未来我决定 提交于 2019-12-03 08:00:02
Does anyone know how to create a scatterplot in R to create plots like these in PRISM's graphpad: I tried using boxplots but they don't display the data the way I want it. These column scatterplots that graphpad can generate show the data better for me. Any suggestions would be appreciated. csgillespie As @smillig mentioned, you can achieve this using ggplot2. The code below reproduces the plot that you are after pretty well - warning it is quite tricky. First load the ggplot2 package and generate some data: library(ggplot2) dd = data.frame(values=runif(21), type = c("Control", "Treated",

How to remove outliers in boxplot in R? [duplicate]

房东的猫 提交于 2019-12-03 07:44:14
问题 This question already has answers here : Closed 6 years ago . Possible Duplicate: Changing the outlier rule in a boxplot I need to visualize my result using box-plot. x<-rnorm(10000) boxplot(x,horizontal=TRUE,axes=FALSE) How can i filter outliers during visualisation? (1) So that i can have full image on screen without having ugly outliers. http://postimage.org/image/szzbez0h1/a610666d/ (2) Is there any way to show outliers upto certain range? http://postimage.org/image/np28oee0b/8251d102/

Best way to generate day-of-week boxplots from a Pandas timeseries

和自甴很熟 提交于 2019-12-03 07:10:22
i am trying to create a set of day-of-week boxplots for a timeseries (e.g. 5-minute temperature observations). My code: # ts is our timeseries ts = df.SomeColumn dow_map = {} days = ['MON','TUE','WED','THU','FRI','SAT','SUN'] dow_idx = ts.index.dayofweek i = 0 for d in days: dow_map[d] = ts[dow_idx == i] i = i + 1 df = pd.DataFrame(dow_map) df.boxplot() results in: --------------------------------------------------------------------------- Exception Traceback (most recent call last) <ipython-input-898-6070c45e4c4b> in <module>() 41 i = i + 1 42 ---> 43 df = pd.DataFrame(dow_map) 44 df.boxplot(

How to add a line in boxplot?

给你一囗甜甜゛ 提交于 2019-12-02 23:09:40
I would like to add lines between "mean" in my boxplot. My code: library(ggplot2) library(ggthemes) Gp=factor(c(rep("G1",80),rep("G2",80))) Fc=factor(c(rep(c(rep("FC1",40),rep("FC2",40)),2))) Z <-factor(c(rep(c(rep("50",20),rep("100",20)),4))) Y <- c(0.19 , 0.22 , 0.23 , 0.17 , 0.36 , 0.33 , 0.30 , 0.39 , 0.35 , 0.27 , 0.20 , 0.22 , 0.24 , 0.16 , 0.36 , 0.30 , 0.31 , 0.39 , 0.33 , 0.25 , 0.23 , 0.13 , 0.16 , 0.18 , 0.20 , 0.16 , 0.15 , 0.09 , 0.18 , 0.21 , 0.20 , 0.14 , 0.17 , 0.18 , 0.22 , 0.16 , 0.14 , 0.11 , 0.18 , 0.21 , 0.30 , 0.36 , 0.40 , 0.42 , 0.26 , 0.23 , 0.25 , 0.30 , 0.27 , 0.15 ,

How to remove outliers in boxplot in R? [duplicate]

拈花ヽ惹草 提交于 2019-12-02 20:27:20
This question already has answers here : Changing the outlier rule in a boxplot (2 answers) Possible Duplicate: Changing the outlier rule in a boxplot I need to visualize my result using box-plot. x<-rnorm(10000) boxplot(x,horizontal=TRUE,axes=FALSE) How can i filter outliers during visualisation? (1) So that i can have full image on screen without having ugly outliers. http://postimage.org/image/szzbez0h1/a610666d/ (2) Is there any way to show outliers upto certain range? http://postimage.org/image/np28oee0b/8251d102/ Regards See ?boxplot for all the help you need. outline: if ‘outline’ is

changing layout of boxplot and adding labels to it

橙三吉。 提交于 2019-12-02 19:44:37
I want to (got suggestion to do so) create boxplot with different look and added labels to it. The expected (not complete) output will look like the following (with every box has quatile labeles) and sample size. boxplot(len~supp*dose, data=ToothGrowth, notch=TRUE, col=(c("gold","darkgreen")), main="Tooth Growth", xlab="Suppliment and Dose", names = supp ) # some unsuccessful trials # to add names boxplot(len~supp*dose, data=ToothGrowth, notch=TRUE, col=(c("gold","darkgreen")), main="Tooth Growth", xlab="Suppliment and Dose", names = supp*dose) # to remove the plot outline boxplot(len~supp

Boxplot sees values that aren't there

一笑奈何 提交于 2019-12-02 17:52:50
问题 I have a IMDB dataset and trying to make a boxplot of a film's ratings. I've successfully loaded the dataset and tried to make the boxplot but it produced a really weird result. It looked as it tried to make a boxplot for all the films and not just the one selected. boxplot(rating ~ title, data=imdb[imdb$title == "Top Gun (1986)", ]) The graph produced: As you can see the y axis looks as if it contained films that aren't in the filtered dataset at all (I selected those via title). 回答1:

Tweaking seaborn.boxplot

怎甘沉沦 提交于 2019-12-02 17:38:04
I would like to compare a set of distributions of scores ( score ), grouped by some categories ( centrality ) and colored by some other ( model ). I've tried the following with seaborn: plt.figure(figsize=(14,6)) seaborn.boxplot(x="centrality", y="score", hue="model", data=data, palette=seaborn.color_palette("husl", len(models) +1)) seaborn.despine(offset=10, trim=True) plt.savefig("/home/i11/staudt/Eval/properties-replication-test.pdf", bbox_inches="tight") There are some problems I have with this plot: There is a large amount of outliers and I don't like how they are drawn here. Can I remove

Remove outliers fully from multiple boxplots made with ggplot2 in R and display the boxplots in expanded format

坚强是说给别人听的谎言 提交于 2019-12-02 17:19:33
I have some data here [in a .txt file] which I read into a data frame df, df <- read.table("data.txt", header=T,sep="\t") I remove the negative values in the column x (since I need only positive values) of the df using the following code, yp <- subset(df, x>0) Now I want plot multiple box plots in the same layer. I first melt the data frame df , and the plot which results contains several outliers as shown below. # Melting data frame df df_mlt <-melt(df, id=names(df)[1]) # plotting the boxplots plt_wool <- ggplot(subset(df_mlt, value > 0), aes(x=ID1,y=value)) + geom_boxplot(aes(color=factor

R boxplot frequency

南楼画角 提交于 2019-12-02 16:31:56
问题 I'm in need of assistance... I'm using R to analyze some data... I have a frequency table called mytable... that I created like this: mytable=table(cut(var1,12),cut(var2,12)) the table looks something like this: 1-2 2-3 3-4 1-3 2 1 2 3-6 0 1 4 6-9 7 1 8 except is a 12 by 12 table. I used boxplot.matrix(mytable) ,the boxplot looks ok... with the 12 boxes corresponding to my 12 stratums, but my boxplot has the frequency as the y-axis and I want the y-axis to be the values from var1, how can I