I wrote an R package called arbintools for some work-related data analysis and put it on Github. I wrote it and have been using it on my Mac for a while without issue; Today, I
The issue is the .so and .o files are only viable with the same architecture e.g. OS X is 64 bit and Windows is 32bit (mingw_32). Please remove them from dev-1/src and then you should be good to go. These files are automatically built on package install as they are the result of using a compiler.
After they are removed, try to create a .gitignore file with the following:
src/*.o
src/*.so
src/*.dll
This will make OS specific files not selectable for staging and, in turn, commits.
As a general rule of thumb, only keep .cpp or .h files within /src while using Rcpp.