3d matrix: how to use (row, column) pairs with 3rd dimension wildcard in MATLAB?

Question

I have a 3 dimensional matrix, and a list of (row, column) pairs. I would like to extract the 2 dimensional matrix that corresponds to the elements in those positions, proje

Answer 1

sub2ind is pretty much what you have to use here to convert your subscripts into linear indices (apart from manually computing the linear indices yourself). You can do something like the following which will convert the rows and cols to a linear index (in a 2D slice) and then it adds an offset (equal to the number of elements in a 2D slice) to these indices to sample all elements in the third dimension.

sz = size(a);
inds = sub2ind(sz(1:2), rows, cols);
inds = bsxfun(@plus, inds, (0:(sz(3)-1)).' * prod(sz(1:2)));
result = a(inds);

And to actually compute the linear indices yourself

inds = (cols - 1) * sz(1) + rows;
inds = bsxfun(@plus, inds, (0:(sz(3) - 1)).' * prod(sz(1:2)));
result = a(inds);

Another option would be to permute your initial matrix to bring the third dimension to the first dimension, reshape it to a 2D matrix, and then use the linear index as the second subscript

% Create a new temporary matrix
anew = reshape(permute(a, [3, 1, 2]), size(a, 3), []);

% Grab all rows (the 3rd dimension) and compute the columns to grab
result = anew(:, (cols - 1) * size(a, 1) + rows);