The way you are copying the list (both ways) is known as a shallow copy. This can be better seen this way:
l1 = [1,2,3]
l2 = [4,5,6]
l3 = [7,8,9]
originalList = [l1,l2,l3]
temp = originalList[:]
l1[0] = 0
>>> temp
[[0, 2, 3], [4, 5, 6], [7, 8, 9]]
>>> originalList
[[0, 2, 3], [4, 5, 6], [7, 8, 9]]
When you make a shallow copy of originalList, you are still getting references to l1, l2, and l3. Any changes you make to those smaller lists will be reflected in both originalList and any shallow copies you make. You want a deep copy operation. For your purposes, Scott Hunter's answer of
temp = [x[:] for x in originalList]
will work. In the general case, the method deepcopy from the copy module should get you a deep copy of whatever objects you need. It is still likely better to use in this case as it is a few orders of magnitude faster.
