When I use TOP command, I could get the following info:
shell@android:/ $ top -n 1
User 31%, System 10%, IO
You didn't mention it in your post, but in the comment you said that you really need CPU utilization per thread, not per process.
If you can't find a tool that's accurate enough, you can look directly in /proc/[pid]/task/[ThreadName] as described in the man page for /proc. This gives total CPU time consumed in "clock ticks" since execution began. Getting better resolution than this is probably difficult or impossible.
Edit
From the OP's comment, a command that lists the relevant information is:
adb shell cat /proc/${pid}/task/*/stat | awk -F\ '{print $1, $14}'
This just cats the correct /proc files to the debugging host, which runs a tiny awk program to print the columns for pid and user time. You could also easily use cut -d " " -f1,14 or something similar in perl to get the columns if awk isn't available.