Using the knitr package:
```{r, engine='bash', code_block_name} ...
E.g.:
```{r, engine='bash', count_lines}
wc -l en_US.twitter.txt
```
You can also use:
engine='sh' for shell
engine='python' for Python
engine='perl', engine='haskell' and a bunch of other C-like languages and even gawk, AWK, etc.