In \"C\", I can run a long blocking process in the background (AND HAVE IT CONTINUE TO RUN) after the starting process has exited.
void main(void)
{
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Your problem is probably due to the trailing &. Try removing it.
getRuntime().exec() is more similar to fork() and exec() than system().
system() passes the command to the shell, and it's Bash that understands that the trailing ampersand means to run the process in the background.
getRuntime().exec() parses the command using a StringTokenizer to parse the command, and doesn't do anything with the trailing ampersand. That's simply passed as the first argument to your some_long_blocking_process, which may exit out immediately on the unknown error.