Spatial nearest neighbor assignment in R

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清歌不尽
清歌不尽 2021-01-07 03:48

I am working on a study that is trying to assign particulate matter exposure to specific individuals based on their addresses. I have two data sets with longitude and lati

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  •  无人及你
    2021-01-07 04:19

    If you have a big dataset you might want to use the very efficient nabor package as explained by @user3507085 in this answer. Since the question is closed as off-topic I have copy-pasted the answer below, so it "stays alive" in this thread. I don't know if this is considered bad practice and I'm happy to delete/edit if requested (note the distances given by knn are not the geographical distances, but I guess they could be converted to spherical distances by a simple transformation including arcsin):

    lonlat2xyz=function (lon, lat, r) 
    {
    lon = lon * pi/180
    lat = lat * pi/180
    if (missing(r)) 
        r <- 6378.1
    x <- r * cos(lat) * cos(lon)
    y <- r * cos(lat) * sin(lon)
    z <- r * sin(lat)
    return(cbind(x, y, z))
    }
    
    lon1=runif(100,-180,180);lon2=runif(100,-180,180);lat1=runif(100,-90,90);lat2=runif(100,-90,90)
    
    xyz1=lonlat2xyz(lon1,lat1)
    xyz2=lonlat2xyz(lon2,lat2)
    
    library(nabor)
    
    out=knn(data=xyz1,query = xyz2,k=20)
    
    library(maps)
    
    map()
    points(lon1,lat1,pch=16,col="black")
    points(lon2[1],lat2[1],pch=16,col="red")
    points(lon1[out$nn.idx[1,]],lat1[out$nn.idx[1,]],pch=16,col="blue")
    

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