In Multi-Paxos algorithm, consider this message flow from the viewpoint of an acceptor:
receive: Prepare(N)
reply: Promise(N, null)
receive: Accept!(
Perhaps a simpler answer is to observe that this is the case when the Prepare(N+1) command was accepted by a majority that did not include the acceptor in question.
To elaborate: Once a leader knows that some majority has Promised(N+1), it then sends Accept(N+1,x) to all acceptors, and even if some other majority of acceptors reply with Accepted(N+1) then consensus has been reached.
This is not that unusual a scenario.