Filter rows after groupby pandas

Question

I have a table in pandas:

import pandas as pd

df = pd.DataFrame({
    \'LeafID\':[1,1,2,1,3,3,1,6,3,5,1],
    \'pidx\':[10,10,300,10,30,40,20,10,30,45,20],         


        

Answer 1

You can use value_counts with boolean indexing and isin:

df = pd.DataFrame({
    'LeafID':[1,1,2,1,3,3,1,6,3,5,1],
    'pidx':[10,10,300,10,30,40,20,10,30,45,20],
    'pidy':[20,20,400,20,15,20,12,43,54,112,23],
    'count':[10,20,30,40,80,10,20,50,30,10,70],
    'score':[10,10,10,22,22,3,4,5,9,0,1]
})
print (df)
    LeafID  count  pidx  pidy  score
0        1     10    10    20     10
1        1     20    10    20     10
2        2     30   300   400     10
3        1     40    10    20     22
4        3     80    30    15     22
5        3     10    40    20      3
6        1     20    20    12      4
7        6     50    10    43      5
8        3     30    30    54      9
9        5     10    45   112      0
10       1     70    20    23      1

s = df.pidx.value_counts()
idx = s[s>2].index
print (df[df.pidx.isin(idx)])
   LeafID  count  pidx  pidy  score
0       1     10    10    20     10
1       1     20    10    20     10
3       1     40    10    20     22
7       6     50    10    43      5

Timings:

np.random.seed(123)
N = 1000000


L1 = list('abcdefghijklmnopqrstu')
L2 = list('efghijklmnopqrstuvwxyz')
df = pd.DataFrame({'LeafId':np.random.randint(1000, size=N),
                   'pidx': np.random.randint(10000, size=N),
                   'pidy': np.random.choice(L2, N),
                   'count':np.random.randint(1000, size=N)})
print (df)


print (df.groupby('pidx').filter(lambda x: len(x) > 120))

def jez(df):
    s = df.pidx.value_counts()
    return df[df.pidx.isin(s[s>120].index)]

print (jez(df))

In [55]: %timeit (df.groupby('pidx').filter(lambda x: len(x) > 120))
1 loop, best of 3: 1.17 s per loop

In [56]: %timeit (jez(df))
10 loops, best of 3: 141 ms per loop

In [62]: %timeit (df[df.groupby('pidx').pidx.transform('size') > 120])
10 loops, best of 3: 102 ms per loop

In [63]: %timeit (df[df.groupby('pidx').pidx.transform(len) > 120])
1 loop, best of 3: 685 ms per loop

In [64]: %timeit (df[df.groupby('pidx').pidx.transform('count') > 120])
10 loops, best of 3: 104 ms per loop

For final_score you can use:

df['final_score'] = df['count'].mul(.4).add(df.score.mul(.6))