I received the following email from Apple when I submit an app update:
We have discovered one or more issues with your recent delivery for \"Project
The version of your ProjectTodayExtension.appex have to be the same as your app. example:
Target> General:
Version: 1.0 <- change here Biuld: 1.0
If the version of your app to get on itunes connect is 2.3, then you must change the version of your TodayExtension to the same version 2.3.