When I create a plot in Jupyter using the ggplot2 R package, I get a link to the chart that says \"View PDF\" instead of the chart being presented inline.
ggplot2
You can show the graphs inline with this option.
options(jupyter.plot_mimetypes = 'image/png')
You can also produce pdf files as you would regularly in R, e.g.
pdf("test.pdf") ggplot(data.frame(a=rnorm(100,1,10)),aes(a))+geom_histogram() dev.off()