Using ToLookup method:
input
.Select((number, index) => new { index , number})
.ToLookup(_ => _.index / 2, _ => _.number)
.Select(_ => _.ToArray())
.ToArray();
Using Zip method:
input
.Zip(input.Skip(1), (_, __) => new[] {_, __})
.Where((_, index) => index % 2 == 0)
.ToArray();