Let say I have a graph where the nodes is stored in a sorted list. I now want to topological sort this graph while keeping the original order where the topological order is
One possibility is to compute the lexicographically least topological order. The algorithm is to maintain a priority queue containing the nodes whose effective in-degree (over nodes not yet processed) is zero. Repeatedly dequeue the node with the least label, append it to the order, decrement the effective in-degrees of its successors, enqueue the ones that now have in-degree zero. This produces 1234567890 on btilly's example but does not in general minimize inversions.
The properties I like about this algorithm are that the output has a clean definition obviously satisfied by only one order and that, whenever there's an inversion (node x appears after node y even though x < y), x's largest dependency is larger than y's largest dependency, which is an "excuse" of sorts for inverting x and y. A corollary is that, in the absence of constraints, the lex least order is sorted order.