pandas groupby sort descending order

Question

pandas groupby will by default sort. But I\'d like to change the sort order. How can I do this?

I\'m guessing that I can\'t apply a sort method to the returned gro

Answer 1

You can do a sort_values() on the dataframe before you do the groupby. Pandas preserves the ordering in the groupby.

In [44]: d.head(10)
Out[44]:
              name transcript  exon
0  ENST00000456328          2     1
1  ENST00000450305          2     1
2  ENST00000450305          2     2
3  ENST00000450305          2     3
4  ENST00000456328          2     2
5  ENST00000450305          2     4
6  ENST00000450305          2     5
7  ENST00000456328          2     3
8  ENST00000450305          2     6
9  ENST00000488147          1    11

for _, a in d.head(10).sort_values(["transcript", "exon"]).groupby(["name", "transcript"]): print(a)
              name transcript  exon
1  ENST00000450305          2     1
2  ENST00000450305          2     2
3  ENST00000450305          2     3
5  ENST00000450305          2     4
6  ENST00000450305          2     5
8  ENST00000450305          2     6
              name transcript  exon
0  ENST00000456328          2     1
4  ENST00000456328          2     2
7  ENST00000456328          2     3
              name transcript  exon
9  ENST00000488147          1    11