How to fill dataframe Nan values with empty list [] in pandas?

Question

This is my dataframe:

          date                          ids
0     2011-04-23  [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13,...
1     2011-04-24  [0,         


        

Answer 1

Surprisingly, passing a dict with empty lists as values seems to work for Series.fillna, but not DataFrame.fillna - so if you want to work on a single column you can use this:

>>> df
     A    B    C
0  0.0  2.0  NaN
1  NaN  NaN  5.0
2  NaN  7.0  NaN
>>> df['C'].fillna({i: [] for i in df.index})
0    []
1     5
2    []
Name: C, dtype: object

The solution can be extended to DataFrames by applying it to every column.

>>> df.apply(lambda s: s.fillna({i: [] for i in df.index}))
    A   B   C
0   0   2  []
1  []  []   5
2  []   7  []

Note: for large Series/DataFrames with few missing values, this might create an unreasonable amount of throwaway empty lists.

Tested with pandas 1.0.5.