According the documentation is is possible to turn off the functionality just doing $(\'body\').off(\'.alert.data-api\'). In the case of tooltip I tried the
$(\'body\').off(\'.alert.data-api\')
To permanently disable a tooltip:
$('[data-toggle="tooltip"]').tooltip("disable");
To stop the tooltip from being displayed on hover but have the ability to re-enable it:
$('[data-toggle="tooltip"]').tooltip("destroy");
$('[data-toggle="tooltip"]').tooltip(); // re-enabling