I have a persistent multiple warning of \"unknown column\" for all types of commands (e.g., str(x) to installing updates on packages), and not sure how to debug this or fix
I ran into this problem too except through a tibble created using a dyplyr block. Here's slight modification of sabre's code to show how I came to the same error.
library(dplyr)
df <- data.frame(id = c(1,1:3), name = c("mary", "jo", "jill","steve"))
t <- df %>%
group_by(id) %>%
summarize (n = n())
t
str(t)
t$newvar[t$id==1] <- 0