Scatter plot with density in Matlab

Question

I would like to plot data set 1 and data set 2 in one plot vertical. Unfortunately the data is huge, so it is just a smear of points and can\'t see the density. I tried hist

Answer 1

Thanks to @Emil Albert for a correction (a transpose was missing)

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What's wrong with computing hist3 and displaying the result with imagesc?

data1 = randn(1,1e5); %// example data
data2 = randn(1,1e5) + .5*data1 ; %// example data correlated to above
values = hist3([data1(:) data2(:)],[51 51]);
imagesc(values.')
colorbar
axis equal
axis xy

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If you want to have the axes in accordance with the true data values: use the second output of hist3 to obtain the positions of the bin centers, and pass them to imagesc:

data1 = randn(1,1e5); %// example data
data2 = 2*randn(1,1e5) + 1.2*data1 + 4; %// example data correlated to above
[values, centers] = hist3([data1(:) data2(:)],[51 51]);
imagesc(centers{:}, values.')
colorbar
axis xy