Intersecting Points and Polygons in R

Question

I am working with shapefiles in R, one is point.shp the other is a polygon.shp. Now, I would like to intersect the points with the polygon, meaning that all

Answer 1

With the new sf package this is now fast and easy:

library(sf)
out <- st_intersection(points, poly)

Additional options

If you do not want all fields from the polygon added to the point feature, just call dplyr::select() on the polygon feature before:

library(magrittr)
library(dplyr)
library(sf)

poly %>% 
  select(column-name1, column-name2, etc.) -> poly

out <- st_intersection(points, poly)

If you encounter issues, make sure that your polygon is valid:

st_is_valid(poly)

If you see some FALSE outputs here, try to make it valid:

poly <- st_make_valid(poly) 

Note that these 'valid' functions depend on a sf installation compiled with liblwgeom.