I used to have Eclipse 3.5.2 working from my Limited User Account (i.e. not Administrator).
But when I upgraded to 3.6.2, Eclipse refuses to run in the Limited User
Make sure you update the permissions of Eclipse and the workspace to whatever user Eclipse runs as. You can use ps -ef | grep -i eclipse
while eclipse is running to find that user.
Once you have the user, you can easily use chown -R user:group ~/Documents/workspace**
Change permission of eclipse itself wherever you have it installed (in my case /opt/):
sudo chmod -R 770 /opt/eclipse
Change permission of workspace wherever you have it located (in my case ~/Documents/):
sudo chmod -R 770 ~/Documents/workspace
Hope this helps my fellow Linux users!
You can try this on windows with the proper syntax.
Thanks to Frederik for your help!