I am developing an Android app using Android Studio (0.89 Build #AI-135.1404660, Built on Sept 3,2014) using both emulator and Nexus 4 device.
I had the same issue w
Check Your Layout Files.
I ran into the same problem and I realized, it gives some problem if you have same layout in multiple orientations(portrait and landscape). If one is changed other remains unchanged and then it creates a conflict. So android studio installs the one with the previous layout
PS: This was happening in my case.