With, say, 3 rows of subplots in matplotlib, xlabels of one row can overlap the title of the next. One has to fiddle with pl.subplots_adjust(hspace)
I find this quite tricky, but there is some information on it here at the MatPlotLib FAQ. It is rather cumbersome, and requires finding out about what space individual elements (ticklabels) take up...
Update:
The page states that the tight_layout() function is the easiest way to go, which attempts to automatically correct spacing.
Otherwise, it shows ways to acquire the sizes of various elements (eg. labels) so you can then correct the spacings/positions of your axes elements. Here is an example from the above FAQ page, which determines the width of a very wide y-axis label, and adjusts the axis width accordingly:
import matplotlib.pyplot as plt
import matplotlib.transforms as mtransforms
fig = plt.figure()
ax = fig.add_subplot(111)
ax.plot(range(10))
ax.set_yticks((2,5,7))
labels = ax.set_yticklabels(('really, really, really', 'long', 'labels'))
def on_draw(event):
bboxes = []
for label in labels:
bbox = label.get_window_extent()
# the figure transform goes from relative coords->pixels and we
# want the inverse of that
bboxi = bbox.inverse_transformed(fig.transFigure)
bboxes.append(bboxi)
# this is the bbox that bounds all the bboxes, again in relative
# figure coords
bbox = mtransforms.Bbox.union(bboxes)
if fig.subplotpars.left < bbox.width:
# we need to move it over
fig.subplots_adjust(left=1.1*bbox.width) # pad a little
fig.canvas.draw()
return False
fig.canvas.mpl_connect('draw_event', on_draw)
plt.show()