Cleaning up factor levels (collapsing multiple levels/labels)

Question

What is the most effective (ie efficient / appropriate) way to clean up a factor containing multiple levels that need to be collapsed? That is, how to combine two or more fa

Answer 1

Since R 3.5.0 (2018-04-23) you can do this in one clear and simple line:

x = c("Y", "Y", "Yes", "N", "No", "H") # The 'H' should be treated as NA

tmp = factor(x, levels= c("Y", "Yes", "N", "No"), labels= c("Yes", "Yes", "No", "No"))
tmp
# [1] Yes  Yes  Yes  No   No   
# Levels: Yes No

1 line, maps multiple values to the same level, sets NA for missing levels" – h/t @Aaron