Remove line breaks in a FASTA file

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予麋鹿
予麋鹿 2020-12-05 01:26

I have a fasta file where the sequences are broken up with newlines. I\'d like to remove the newlines. Here\'s an example of my file:

>accession1
ATGGCC         


        
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  •  独厮守ぢ
    2020-12-05 01:53

    Another variation :-)

    awk '!/>/{printf( "%s", $0);next}
         NR>1{printf( "\n")} 
         END {printf"\n"}
         7' YourFile
    

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