Other problem that might be causing such behavior are build configurations.
I had two projects with configurations set to be built to specific folders.
Like Debug and Any CPU and in second it was Debug and x86.
What I did I went to Solution->Context menu->Properties->Configuration properties->Configuration and I set all my projects to use same configurations Debug and x86 and also checked Build tick mark.
Then projects started to build correctly and were able to see namespaces.
