I clone my repository with:
git clone ssh://xxxxx/xx.git
But after I change some files and add and commit them,
For me,following worked to move untracked files:
git add --all
Next, I followed similar steps
git commit -m "First commit"
Then,
git remote add origin git@github.....
Last but not the least:
git push -u origin master
As you do this, Windows security will pop up asking for your username and password.