I have several ggplots as objects on my ls. I want to save them as separate files (although I would also be interested to know how to save them all under 1 big file). I have
it's best to have your plots in a list
l = mget(plots)
Then you can simply print them page-by-page,
pdf("all.pdf")
invisible(lapply(l, print))
dev.off()
or save one plot per file,
invisible(mapply(ggsave, file=paste0("plot-", names(l), ".pdf"), plot=l))
or arrange them all in one page,
ggsave("arrange.pdf", arrangeGrob(grobs = l))
or arrange them 2x2 in multiple pages,
ggsave("arrange2x2.pdf", marrangeGrob(grobs = l, nrow=2, ncol=2))
etc.
(untested)