I am moving 6000 small div elements in an css3 experiment using a transition from top: 0 to top: 145px to test performance.
Using n
The reason animation was slower when you added the null transform hack (translateZ(0)) is that each null 3D transform creates a new layer. When there are too many of these layers, rendering performance suffers because the browser needs to send a lot of textures to the GPU.
The problem was noticed in 2013 on Apple's homepage, which abused the null transform hack. See http://wesleyhales.com/blog/2013/10/26/Jank-Busting-Apples-Home-Page/
The OP also correctly noticed the explanation in their comment:
Moving few big objects is more performant than moving lots of small items when using 3D-acceleration because all the 3D-accelerated layers have to be transferred to the GPU and the way back. So even if the GPU does a good job, the transfer of many objects might be a problem so that using GPU acceleration might not be worth it.