I\'m trying to programmatically check file associations by the file extension (for example .jnlp files). I keep reading that
Take a look in:
HKEY_CURRENT_USER\Software\Microsoft\Windows\CurrentVersion\Explorer\FileExts\
and the sub-key of that is the extension you reassigned. Under that there will be the UserChoice and OpenWithList sub-keys which will contain your redefinition.
You may also want to read http://support.microsoft.com/kb/950505 which talks about your issue.