I am using knitr (1.9.5 and 1.9.17) and rmarkdown (0.5.3.1), and would like to hold figure position in the pdf output. The generated pdf file is working fine when chunk opti
As Yihui mentioned in his answer (Figure position in markdown when converting to PDF with knitr and pandoc), we cannot expect too much about formatting from mardown. To workaround this problem, just write some R scripts to replace htbp to H.
Compared with knit from knitr package, I found render from rmarkdown is better to export a tex file. Just remember to add keep_tex: yes in the yaml header of your rmarkdown file.
library(rmarkdown)
render('filepath.Rmd')
x <- readLines('filepath.tex')
pos <- grep('begin\\{figure\\}\\[htbp\\]', x)
x[pos] <- gsub('htbp', 'H', x[pos])
writeLines(x, 'filepath.tex')
tools::texi2pdf('filepath.tex', clean = TRUE) # gives foo.pdf
file.remove('filepath.tex')