From time to time I lose breakpoint functionality in Delphi.
I thought this to be a Delphi 2009 issue but now I have also it in Delphi XE.
In Delphi 2009 by
By using F9 to run the app, breakpoints will work as expected. I am using XE4 and I do not know if this will "fix" prior versions of Delphi.