I\'ve just upgraded a project from VS2008 to VS2010 but I\'m still targeting the 3.5 framework.
In my project file I have a custom task to run SGEN to generate my X
MSBuild uses the registry to get the path to the v3.5 tools. The MSBuild tasks that require v3.5 SDK tools will fall back to the v4.0 path if the path to the 3.5 tools can't be identified - look at the logic used to set the TargetFrameworkSDKToolsDirectory property in C:\Windows\Microsoft.NET\Framework\v4.0.30319\Microsoft.NETFramework.props if you're really interested.
You can diagnose and fix this problem as follows:
Install Process Monitor and set up a filter to monitor registry access by msbuild (Event class: Registry, Process Name: msbuild.exe, all types of result).
Run your build.
Search Process Monitor for a RegQueryValue access matching "MSBuild\ToolsVersions\4.0\SDK35ToolsPath". Note that this could be be under either "HKEY_LOCAL_MACHINE\SOFTWARE\Microsoft" or "HKEY_LOCAL_MACHINE\SOFTWARE\Wow6432Node\Microsoft".
If you have a look at this key in the registry, you'll see that it aliases another registry value, e.g. "$(Registry:HKEY_LOCAL_MACHINE\SOFTWARE\Microsoft\Microsoft SDKs\Windows\v7.1\WinSDK-NetFx35Tools-x86@InstallationFolder)" Shortly after this, you'll probably see a "NAME NOT FOUND" result. If you look at where the expected key should be, you'll see that they don't match the key being requested (missing hyphens and possibly no key ending with "-86").
It should be clear what you need to correct. I chose to export the incorrect keys, edit the .reg file and run it to create the correct keys.
One cause of invalid registry entries could be a bug with the Microsoft SDK v7.1 installation:
http://connect.microsoft.com/VisualStudio/feedback/details/594338/tfs-2010-build-agent-and-windows-7-1-sdk-targeting-net-3-5-generates-wrong-embedded-resources