I have a setInterval running a piece of code 30 times a second. This works great, however when I select another tab (so that the tab with my code becomes inacti         
        
I ran into the same problem with audio fading and HTML5 player. It got stuck when tab became inactive. So I found out a WebWorker is allowed to use intervals/timeouts without limitation. I use it to post "ticks" to the main javascript.
WebWorkers Code:
var fading = false;
var interval;
self.addEventListener('message', function(e){
    switch (e.data) {
        case 'start':
            if (!fading){
                fading = true;
                interval = setInterval(function(){
                    self.postMessage('tick');
                }, 50);
            }
            break;
        case 'stop':
            clearInterval(interval);
            fading = false;
            break;
    };
}, false);
Main Javascript:
var player = new Audio();
player.fader = new Worker('js/fader.js');
player.faderPosition = 0.0;
player.faderTargetVolume = 1.0;
player.faderCallback = function(){};
player.fadeTo = function(volume, func){
    console.log('fadeTo called');
    if (func) this.faderCallback = func;
    this.faderTargetVolume = volume;
    this.fader.postMessage('start');
}
player.fader.addEventListener('message', function(e){
    console.log('fader tick');
    if (player.faderTargetVolume > player.volume){
        player.faderPosition -= 0.02;
    } else {
        player.faderPosition += 0.02;
    }
    var newVolume = Math.pow(player.faderPosition - 1, 2);
    if (newVolume > 0.999){
        player.volume = newVolume = 1.0;
        player.fader.postMessage('stop');
        player.faderCallback();
    } else if (newVolume < 0.001) {
        player.volume = newVolume = 0.0;
        player.fader.postMessage('stop');
        player.faderCallback();
    } else {
        player.volume = newVolume;
    }
});