I have a graph of N vertices where each vertex represents a place. Also I have vectors, one per user, each one of N coefficients where the coefficient\'s value is the duration i
Cosine similarity is meant for the case where you do not want to take length into accoun, but the angle only. If you want to also include length, choose a different distance function.
Cosine distance is closely related to squared Euclidean distance (the only distance for which k-means is really defined); which is why spherical k-means works.
The relationship is quite simple:
squared Euclidean distance sum_i (x_i-y_i)^2 can be factored into sum_i x_i^2 + sum_i y_i^2 - 2 * sum_i x_i*y_i. If both vectors are normalized, i.e. length does not matter, then the first two terms are 1. In this case, squared Euclidean distance is 2 - 2 * cos(x,y)!
In other words: Cosine distance is squared Euclidean distance with the data normalized to unit length.
If you don't want to normalize your data, don't use Cosine.