Spark: java.io.IOException: No space left on device

断了今生、忘了曾经 提交于 2019-12-18 16:39:09

问题


Now I am learning how to use spark.I have a piece of code which can invert a matrix and it works when the order of the matrix is small like 100.But when the order of the matrix is big like 2000 I have an exception like this:

15/05/10 20:31:00 ERROR DiskBlockObjectWriter: Uncaught exception while reverting partial writes to file /tmp/spark-local-20150510200122-effa/28/temp_shuffle_6ba230c3-afed-489b-87aa-91c046cadb22

java.io.IOException: No space left on device

In my program I have lots of lines like this:

val result1=matrix.map(...).reduce(...)
val result2=result1.map(...).reduce(...)
val result3=matrix.map(...)

(sorry about that because the code is to many to write there)

So I think when I do this Spark create some new rdds,and in my program Spark creates too many rdds so I have the exception.I am not sure if what I thought is correct.

How can I delete the rdds that I won't use any more?Like result1 and result2?

I have tried rdd.unpersist(), it doesn't work.


回答1:


This is because Spark create some temp shuffle files under /tmp directory of you local system.You can avoid this issue by setting below properties in your spark conf files.

Set this property in spark-env.sh.

SPARK_JAVA_OPTS+=" -Dspark.local.dir=/mnt/spark,/mnt2/spark -Dhadoop.tmp.dir=/mnt/ephemeral-hdfs"

export SPARK_JAVA_OPTS



回答2:


According to the Error message you have provided, your situation is no disk space left on your hard-drive. However, it's not caused by RDD persistency, but shuffle which you implicitly required when calling reduce.

Therefore, you should clear your drive and make more spaces for your tmp folder




回答3:


As a complementary, to specify default folder for you shuffle tmp files, you can add below line to $SPARK_HOME/conf/spark-defaults.conf:

spark.local.dir /mnt/nvme/local-dir,/mnt/nvme/local-dir2



来源:https://stackoverflow.com/questions/30162845/spark-java-io-ioexception-no-space-left-on-device

标签
易学教程内所有资源均来自网络或用户发布的内容,如有违反法律规定的内容欢迎反馈
该文章没有解决你所遇到的问题?点击提问,说说你的问题,让更多的人一起探讨吧!