Where is knitr cached output stored?

问题

In the cache directory, one can use lazyLoad to view the environment at the end of a chunk. But where is the output of the chunk (that will be printed if the document is compiled) stored?

回答1:

Use the source!

Look at the source code here https://github.com/yihui/knitr/blob/master/R/cache.R

You can see that the mechanism is explained here (within the new_cache function)

# when cache=3, code output is stored in .[hash], so cache=TRUE won't lose
# output as cacheSweave does; for cache=1,2, output is the evaluate() list
cache_output = function(hash, mode = 'character') {
  get(sprintf('.%s', hash), envir = knit_global(), mode = mode, inherits = FALSE)
}

I.e. it is stored as an object in the knit_global environemnt`

You can inspect these objects by ls(knitr::knit_global(), all = TRUE)

I.e. the 3 simple chunks below

```{r, cache=TRUE}
summary(cars)
```

```{r }
 ls(knitr::knit_global(), all = TRUE)

```


```{r }
 get(ls(knitr::knit_global(), all = TRUE)[1], knitr::knit_global())

```

Give following output

summary(cars)
##      speed           dist    
##  Min.   : 4.0   Min.   :  2  
##  1st Qu.:12.0   1st Qu.: 26  
##  Median :15.0   Median : 36  
##  Mean   :15.4   Mean   : 43  
##  3rd Qu.:19.0   3rd Qu.: 56  
##  Max.   :25.0   Max.   :120
 ls(knitr::knit_global(), all = TRUE)
## [1] ".Preview-2b40490e2591_cache/unnamed-chunk-1_766fcb86fd875984b372e3c23210bfad"
## [2] "metadata"
 get(ls(knitr::knit_global(), all = TRUE)[1], knitr::knit_global())
## [1] "\n```r\nsummary(cars)\n```\n\n```\n##      speed           dist    \n##  Min.   : 4.0   Min.   :  2  \n##  1st Qu.:12.0   1st Qu.: 26  \n##  Median :15.0   Median : 36  \n##  Mean   :15.4   Mean   : 43  \n##  3rd Qu.:19.0   3rd Qu.: 56  \n##  Max.   :25.0   Max.   :120\n```"

If you have exited R, you can load the data from the file *.RData in the cache folder using the load command. Also, to output the result of get, consider to use cat which will turn the "\n" into lines and should look like original output.

来源：https://stackoverflow.com/questions/23721859/where-is-knitr-cached-output-stored

标签

knitr