pyspark

Working with a StructType column in PySpark UDF

老子叫甜甜 提交于 2021-02-11 15:02:32
问题 I have the following schema for one of columns that I'm processing, |-- time_to_resolution_remainingTime: struct (nullable = true) | |-- _links: struct (nullable = true) | | |-- self: string (nullable = true) | |-- completedCycles: array (nullable = true) | | |-- element: struct (containsNull = true) | | | |-- breached: boolean (nullable = true) | | | |-- elapsedTime: struct (nullable = true) | | | | |-- friendly: string (nullable = true) | | | | |-- millis: long (nullable = true) | | | |--

Sagemaker processing job with PySpark and Step Functions

南笙酒味 提交于 2021-02-11 15:02:27
问题 this is my problem: I have to run a Sagemaker processing job using custom code written in PySpark. I've used the Sagemaker SDK by running these commands: spark_processor = sagemaker.spark.processing.PySparkProcessor( base_job_name="spark-preprocessor", framework_version="2.4", role=role_arn, instance_count=2, instance_type="ml.m5.xlarge", max_runtime_in_seconds=1800, ) spark_processor.run( submit_app="processing.py", arguments=['s3_input_bucket', bucket_name, 's3_input_file_path', file_path ]

Pyspark EMR Conda issue

梦想与她 提交于 2021-02-11 14:46:28
问题 i am trying to run a spark script on EMR with custom conda env, 1. created a booststap for conda setup and supplied to the EMR, i don't see any issues with bootstrap but when i do spark-submit it gives me same error no sure what am i missing Traceback (most recent call last): File "/mnt/tmp/spark-b334133c-d22d-42d4-beba-b85fffbbc9c7/iris_cube_analysis.py", line 3, in <module> import iris ImportError: No module named iris spark-submit - spark-submit --deploy-mode client --master yarn --conf

Spark, how to print the query?

纵然是瞬间 提交于 2021-02-11 14:36:02
问题 I'm using pyspark df = self.sqlContext.read.option( "es.resource", indexes ).format("org.elasticsearch.spark.sql").load() df = df.filter( df.data.timestamp >= self.period_start ) I'd like to see sql query version of df if possible. something like print(df.query) to see something like select * from my-indexes where data.timestamp > self.period_start 回答1: You can check out this piece of documentation for pyspark.sql.DataFrame.explain . explain prints the (logical and physical) plan to the

How to Read a parquet file , change datatype and write to another Parquet file in Hadoop using pyspark

爱⌒轻易说出口 提交于 2021-02-11 14:10:27
问题 My source parquet file has everything as string. My destination parquet file needs to convert this to different datatype like int, string, date etc. How do I do this? 回答1: you may wanted to apply userdefined schema to speedup data loading. There are 2 ways to apply that- using the input DDL-formatted string spark.read.schema("a INT, b STRING, c DOUBLE").parquet("test.parquet") Use StructType schema customSchema = StructType([ StructField("a", IntegerType(), True), StructField("b", StringType(

PySpark returns an exception when I try to cast string columns as numeric

試著忘記壹切 提交于 2021-02-11 14:00:38
问题 I'm trying to cast string columns to numeric, but I am getting an exception in PySpark. I provide below the code and the error message. Is it possible to import the specific columns from the csv file as numeric? (the default is to be imported as strings). What are my alternative? My code and the error messages follow below: import pandas as pd import seaborn as sns import findspark findspark.init() import pyspark from pyspark.sql import SparkSession # Loads data. Be careful of indentations

Spark reading Partitioned avro significantly slower than pointing to exact location

十年热恋 提交于 2021-02-11 13:35:22
问题 I am trying to read partitioned Avro data which is partitioned based on Year, Month and Day and that seems to be significantly slower than pointing it directly to the path. In the Physical plan I can see that the partition filters are getting passed on, so it is not scanning the entire set of directories but still it is significantly slower. E.g. reading the partitioned data like this profitLossPath="abfss://raw@"+datalakename+".dfs.core.windows.net/datawarehouse/CommercialDM.ProfitLoss/"

Spark reading Partitioned avro significantly slower than pointing to exact location

瘦欲@ 提交于 2021-02-11 13:33:04
问题 I am trying to read partitioned Avro data which is partitioned based on Year, Month and Day and that seems to be significantly slower than pointing it directly to the path. In the Physical plan I can see that the partition filters are getting passed on, so it is not scanning the entire set of directories but still it is significantly slower. E.g. reading the partitioned data like this profitLossPath="abfss://raw@"+datalakename+".dfs.core.windows.net/datawarehouse/CommercialDM.ProfitLoss/"

Unable to locate hive jars to connect to metastore : while using pyspark job to connect to athena tables

坚强是说给别人听的谎言 提交于 2021-02-11 13:19:44
问题 We are using sagemaker instance to connect to EMR in AWS. We are having some pyspark scripts that unloads athena tables and processes them as part of pipeline. We are using athena tables using glue catalog but when we try to run the job via spark submit, our job fails Code snippet from pyspark import SparkContext, SparkConf from pyspark.context import SparkContext from pyspark.sql import Row, SQLContext, SparkSession import pyspark.sql.dataframe def process_data(): conf = SparkConf()

java.lang.ClassNotFoundException: com.johnsnowlabs.nlp.DocumentAssembler spark in Pycharm with conda env

◇◆丶佛笑我妖孽 提交于 2021-02-11 12:28:35
问题 I saved a pre-trained model from spark-nlp, then I'm trying to run a Python script in Pycharm with anaconda env: Model_path = "./xxx" model = PipelineModel.load(Model_path) But I got the following error: (I tried with pyspark 2.4.4 & spark-nlp2.4.4, and pyspark 2.4.4 & spark-nlp2.5.4) Got the same error: 21/02/05 13:31:21 WARN NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable Using Spark's default log4j profile: org/apache